COMM COM INF SC, 2021, 1510 CCIS(1):58-72

Exploiting Structural Constraints of Proteolytic Catalytic Triads for Fast Supercomputer Scaffold Probing in Enzyme Design Studies

Evolutionary constraints on the effectiveness of enzymatic function result in well-defined architectures of active sites. In this study we show that these constraints are fully pronounced even at the backbone level. We explore the possibility of defining catalytic triads in proteases just by their relative backbone orientations to dramatically speed up the scaffold search problem of de novo enzyme design. An order of magnitude speed-up achieved this way paves a way to a routine scanning of the whole structural proteome including modeled structures.

Zlobin A, Ermidis AP, Maslova V, Belyaeva J, Golovin A

IBCH: 9850
Ссылка на статью в журнале: https://link.springer.com/10.1007/978-3-030-92864-3_5
Кол-во цитирований на 10.2024: 3
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Список научных проектов, где отмечена публикация

  1. -Разработка каталитического антитела к RBD домену S-белка вируса SARS-CoV-2 (January 6, 2021 — December 31, 2024). Golovin A.V.. Grant, RSF.